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1000 Asia Pacific J Clin Nutr (1996) Vol5, No 1: 2-9

Asia Pacific J Clin Nutr (1996) Vol5, No 1: 2-9

Intestinal flora and human health

Tomotari Mitsuoka, DVM, PhD

Professor Emeritus, The University of Tokyo, Japan


There is a growing interest in intestinal flora and human health and disease. The intestines of humans contain 100 trillion viable bacteria. These live bacteria, which make up 30% of the faecal mass, are known as the intestinal flora. There are two kinds of bacteria in the intestinal flora, beneficial and harmful. In healthy subjects, they are well balanced and beneficial bacteria dominate. Beneficial bacteria play useful roles in the aspects of nutrition and prevention of disease. They produce essential nutrients such as vitamins and organic acids, which are absorbed from the intestines and utilised by the gut epithelium and by vital organs such as the liver. Organic acids also suppress the growth of pathogens in the intestines.

Other intestinal bacteria produce substances that are harmful to the host, such as putrefactive products, toxins and carcinogenic substances. When harmful bacteria dominate in the intestines, essential nutrients are not produced and the level of harmful substances rises. These substances may not have an immediate detrimental effect on the host but they are thought to be contributing factors to ageing, promoting cancer, liver and kidney disease, hypertension and arteriosclerosis, and reduced immunity. Little is known regarding which intestinal bacteria are responsible for these effects. A number of factors can change the balance of intestinal flora in favour of harmful bacteria. These include peristalsis disorders, surgical operations of stomach or small intestine, liver or kidney diseases, pernicious anaemia, cancer, radiation or antibiotic therapies, immune disorders, emotional stress, poor diet and ageing.

However, more importantly, the normal balance of intestinal flora may be maintained, or restored to a normal from an unbalanced state, by oral bacterio-therapy or by a well balanced diet. Oral bacterio-therapy using intestinal strains of lactic acid bacteria, such as lactobacillus and bifidobacteria, can restore normal intestinal balance and produce beneficial effects. Benefits include suppression of intestinal putrification so as to reduce constipation and other geriatric diseases; prevention and treatment of diarrhoea including antibiotic-associated diarrhoea; stimulation of the immune system; and increased resistance to infection.


Ecological significance of intestinal flora

A single individual harbours in the intestine 100 trillion viable bacteria and so 1000 me 100 different bacterial species, which constitute the intestinal flora. In mutual symbiotic or antagonistic relationships, these organisms grow on ingested food components and those secreted into the alimentary tract by the host, and excreted. In the past, most of these organisms have been considered to be dead, but marked advances in culturing techniques for anaerobic bacteria enable cultivation of over 70% of the microscopic count of bacteria in human faeces, and often more than 90%.

Major bacterial groups composing the intestinal flora

The major bacterial groups detected in the intestinal flora are roughly divided into the following three groups:

  1. the lactic acid bacteria group (LAB), including Bifidobacterium, Lactobacillus and Streptococcus including Enterococcus;
  2. the anaerobic group, including Bacteroidaceae, anaerobic curved rods, Eubacterium, Peptococcaceae, Veillonella, Megasphaera, Gemmiger, Clostridium, and Treponema; and
  3. the aerobic group, including Enterobacteriaceae, Staphylococcus, Bacillus, Corynebacterium, Pseudo-monas, and yeasts (Table 1) 1.

Development of the intestinal flora of infants

The fetus exists in a sterile environment until birth. After birth it rapidly becomes colonised by bacteria. On the 1st to 2nd days of life, the large intestine of neonates fed with breast milk and supplementary cow’s milk is colonised by enterobacteriaceae, streptococci including enterococci, and clostridia. On the 3rd day, bacteroides, bifidobacteria and clostridia occur in 40% of infants. Between days 4 and 7, bifidobacteria become predominant accounting to 1010 to 1011 organisms per gram faeces, and clostridia, bacteroides, enterobacteriaceae, streptococci, and staphylococci decrease. Thus, nearly 100% of all bacteria cultured from stools of breast-fed infants were bifidobacteria (Fig.1) 1.

Figure 1. Development of the faecal flora of neonates.

Table 1. Differentiation of major intestinal bacterial groups
Bacterial group

Gram-staining

Aerobic growth

Spore

Major fermentation products

LAB group        
Lactobacillus

+

+

--

Lactic acid

Bifidobacterium

+

--

--

Acetic acid + lactic acid

Streptococcus

+

+

--

Lactic acid

Anaerobic group        
Bacteroidaceae

--

--

--

Various products

Anaerobic curved rods

--

--

--

Succinic acid, butyric acid

Eubacterium

+

--

--

Various products

Peptococcaceae

+

--

--

Various products

Veillonella

--

--

--

Acetic acid + propionic acid

Megasphaera

--

--

--

Caproic acid + butyric acid

Gemmiger

--

--

--

 
Clostridium

+/--

--

+

Various products

Treponema

--

--

--

 
Aerobic group        
Enterobacteriaceae

--

+

--

 
Staphylococcus

+

+

--

 
Bacillus

+

+

+

 
Corynebacterium

+

+

--

 
Pseudomonas

--

+

--

 
Yeasts

+< 1000 /p>

+

--

 
Morphology

The intestinal flora of children and adults

Although bifidobacteria have been considered to be the most important organisms for infants and lactobacilli and Escherichia coli are more numerous bacteria for children and adults than bifidobacteria, it has now become clear that bifidobacteria also constitute a member of the major organisms in the colonic flora of healthy children and adults. During weaning, when an adult diet is consumed, the stools of infants shifted to the Gram-negative bacillary flora of adults: bifidobacteria decrease by 1 log, the numbers of bacteroidaceae, eubacteria, peptococcaceae, and usually clostridia outnumber bifidobacteria, which constitute 5 to 10% of the total flora. The counts of enterobacteriaceae, and streptococci decrease to less than 108 per gram faeces. Lactobacilli, megasphaerae, and veillonellae are often found in adult faeces, but the counts are usually less than 107 per gram faeces. The species and biovars alter from infant-type such as B. infantis and B. breve to adult-type such as B. adolescentis and B. longum (Fig.2) 1.

Figure 2. Composition of the faecal flora in adults.

The intestinal flora of elderly persons

In elderly persons bifidobacteria decrease or diminish, clostridia including C. perfringens significantly increase, and lactobacilli, streptococci and enterobacteriaceae also increase. This phenomenon is considered to be a result of ageing, but it might accelerate senescence (Fig.3) 1.

Figure 3. Changes in the faecal flora with increased age.

Disturbances in the intestinal flora

Although the composition of the intestinal flora is rather stable in healthy individuals, it can be altered by many endogenous and exogenous factors such as peristalsic disorders, cancer, surgical operations of stomach or small intestine, liver or kidney diseases, pernicious anaemia, blind loop syndrome, radiation therapy, emotional stress, disorders of immune systems, administration of antibiotics, and ageing.

Disturbances in the intestinal flora are non-specific: the small intestine harbours large numbers of bacteria, particularly anaerobes, enterobacteriaceae and strepto-cocci; bifidobacteria disappear or considerably decrease in the large intestine, while enterobacteriaceae and strepto-cocci remarkably increase and, some times, Clostridium perfringens also increase.

These ecological evidences would suggest that bifidobacteria should exist in the large intestine for maintenance of health and are far more important than Lactobacillus acidophilus as the beneficial intestinal bacteria throughout human life. In other words, the reduction or disappearance of bifidobacteria in human intestine would indicate an "unhealthy" state.

Role of the intestinal flora in human health

Metabolic profile of the intestinal flora

The intestinal flora is composed of different bacterial species, and thus, contains a variety of enzymes that perform the extremely varied types of metabolism in the intestine, and influence the host’s health and resistance to disease (Fig. 4). This includes such factors as: nutrition, physiological function, drug efficacy, carcinogenesis, ageing, immunological response and resistance to infection, endotoxins, and various other stresses. Within the intestine, the bacteria are implicated in the conversion of various substances that produce both beneficial and detrimental products to the host. In addition, bacterial toxins and cell components produced by some bacterial species modify the host’s immune responses, enhancing or inhibiting immune function. The beneficial intestinal flora protect the intestinal tract from proliferation or infection of harmful bacteria, while the detrimental bacteria manifest pathogenicity when the host’s resistance is decreased.

Figure 4. Enzymatic activities of intestinal bacteria.

The intestinal flora may play an important role in the causation of cancer and ageing

Dietary factors are considered important environmental risk determinants for colorectal cancer development. From epidemiological observations, a high fat intake is associated positively and a high fibre intake negatively with colorectal cancer. This is thought to occur by the following mechanisms. From food components in the gastrointestinal tract, organisms produce various carcinogens from the dietary components and endogenous substances, detoxify carcinogens, or enhance the host’s immune function, which results in changes in the incidence of cancers. The ingestion of large amounts of animal fat enhances bile secretion, causing an increase in bile acid and cholesterol in the intestine. These increased substances are converted by intestinal bacteria into secondary bile acids, their derivatives, aromatic polycyclic hydrocarbons, oestrogen and epoxides derivatives that are related to carcinogenesis. Various tryptophan metabolites (indole, skatole, 3-hydroxykinurenine, 3-hydroxyanthranilic acid, etc.) phenols, amines, and nitroso compounds produced by intestinal bacteria from protein also participate in carcinogenesis (Fig. 5). However, some intestinal bacteria reportedly inactivate noxious substances in the intestine.

Figure 5. Relationships among diet, intestinal bacteria and cancer.

Recent epidemiological studies have revealed that insufficient intake of dietary fibre is associated with high incidences of Western dis 1000 eases such as colorectal cancer, obesity, heart disease, diabetes, and hypertension. Ingested dietary fibre causes increased volume of faeces, dilution of noxious substances, and shortening of the transit time of intestinal contents, resulting in early excretion of noxious substances such as carcinogens produced by intestinal bacteria.

The cell components of intestinal bacteria modify the host’s immune function; some enhance immune response and others suppress it, involving them indirectly in the suppression or enhancement of carcinogenesis.

It is completely unknown at present which of these mechanisms plays the key role in carcinogenesis. Our studies with gnotobiotic mice showed that the presence of bacteria in the intestine can have marked effect on the incidence of liver tumours in C3H/He mice. Mice with conventional microflora had a much higher incidence of hepatic tumours (about 75% after 1 year) than their germfree counterparts (30% incidence after 1 year).

Table 2. Incidence of liver tumour in germfree (GF), conventionalised (CV), and gnotobiotic (GB) C3H/He male mice associated with human intestinal bacteria 1000
Group Bacteria

NB

Liver tumour (%)*

GF Germfree

0

30

CV Conventionalised  

75

GB6 Mitsuokella multiacida A4052

9.7

75

GB2 Enterococcus faecalis M266TA

9.7

67

GB1 Escherichia coli M66

10.3

62

GB13 Bifidobacterium longum E194b

10.1

47

GB20 Escherichia coli M66

10.2

100

  Enterococcus faecalis M266TA

10.2

 
  Clostridium paraputrificum VPI1586

9.5

 
  Clostridium paraputrificum VP16558
   
GB7 Escherichia coli M66

9.9

88

  Clostridium perfringens MAC521

9.5

 
GB9 Escherichia coli M66

9.7

80

  Enterococcus faecalis M266TA

9.9

 
  Bacteroides vulgatus M45

10.1

 
GB21 Escherichia coli M66

9.3

46

  Enterococcus faecalis M266TA

10.2

 
  Clostridium paraputrificum VPI1586

9.6

 
  Clostridium paraputrificum VP16558    
  Bifidobacterium longum E194b

9.8

 

NB= number of bacteria established log/g faeces ; * = percentage of animals

Table 3. Comparison of lifespan of germfree (GF) conventional (CV) female mice and gnotobiotic (GB) CF#1 female mice associated with human intestinal bacteria.
 

Animals

Bacterial strains used

GF

CV

GB-1

GB-2

GB-3

Bifidobacterium longum E194b

--

*

9.8a

--

9.8

Clostridium perfringens MAC521

--

*

8.6

8.6

--

Escherichia coli 123

--

*

9.1

10.0

9.4

Enterococcus faecalis 1-12

--

*

10.1

10.1

10.1

Bacteroides vulgatus M-64

--

*

10.3

10.1

10.3

Eubacterium aerofaciens 151

--

*

10.3

10.3

10.3

Lifespan

96.3

78.2

87.1

80.7

87.1

(Means ± SD of age in weeks)

± 14.6

± 22.2

± 19.9

± 21.5

± 17.6

*: Conventional rat flora. a: No. of bacteria established (log/ g faeces)

Furthermore, when germfree mice were contaminated with specific intestinal bacteria, isolated from humans, the tumour incidence ranged up to 100%; of the mono-contaminated mice Mitsuokella multiacidatumours in 75% of the mice, Enterococcus faecalis gave in 67%, Escherichia coli in 62%, and B. longum in 47%. When mixtures of strains were used, high rates of tumour production were observed with mixtures of E. coli + E. faecalis + C. paraputrificum (100%), coli + C. per-fringens (88%), or E. coli + E. faecalis + B. E. vulgatus(80%). However, this promoting effect was suppressed by 46% by the addition of Bifidobacterium longum to the first promoting combination (Tabl 1000 e 2) 3,4.

We also studied the effect of intestinal flora on longevity. Germfree (GF) mice, conventional mice, and gnotobiotic (GB) mice (GB-1) associated with E. coli, Enterococcus faecalis, Bacteroides vulgatus, Eubacterium aerofaciens, Bifidobacterium longum and Clostridium perfringens, and those associated with the same combination of intestinal bacteria without B. longum (GB-2) or C. perfringens (GB-3) were produced, and maintained until their natural death (Table 3). Average life spans of GF female were longest, 96.3 weeks, 78.2 weeks in CV, 87.1 weeks in GB-1, 80.7 weeks in GB-2, and 87.1 weeks in GB-3: the average life spans were shorter in GB-2 than in GF. There was also no difference in average life spans between GB-1 and GB-3. These findings suggest that the presence of B. longum may be related to longevity in GB animals.

These two studies suggested that intestinal bacteria are related to both promotion and prevention of cancer and ageing. The mechanism of the suppressive effect of bifidobacteria on liver tumours might be related to detoxifying carcinogens by bifidobacteria.

Dietary control of intestinal flora for human health

Evidence that the intestinal flora is closely related to the host’s health and disease indicates the importance of the balance of the intestinal flora for health and longevity. In other words, the increase of harmful bacteria in the intestine may ultimately lead to various disorders, such as liver and kidney disorders, atherosclerosis, hypertension, cancer, and ageing. A satisfactory balance of the intestinal flora is possibly achieved by a nutritionally varied diet, and inclusion of dietary fibre and fermented milk which promote useful bacteria or suppress harmful bacteria.

Effect of intake of dietary fibre or oligosaccharides

Human digestive enzymes have little or no effect on raw starch and polysaccharides such as cellulose, pectin, hemicellulose, and pentosan; and oligosaccharides such as melibiose, raffinose, stachyose, fructo-oligosaccharides, isomalto-oligosaccharides, and galacto-oligosaccharides. These substances are hydrolysed to varying degrees and digested by colonic bacteria with the production of organic acids, mainly volatile fatty acids (acetate, propionate, and butyrate), and gas (carbon dioxide and hydrogen). Small amounts of lactic, formic and succinic acids are also produced. Methane may be produced in some people.

Figure 6. Changes in faecal bifidobacteria by the administration of FOS. FOS (8g/ day) were administered to aged subjects.

Most Bifidobacterium species metabolise a wide rage of indigestible polysaccharides and oligosaccharides to acetic and lactic acids and subsequently act as effective scavengers in the large intestine, when many oligosaccharides are ingested in the diet, while E. col 1000 i and C. perfringens do not.

In this way several commercially available oligosaccharides including raffinose, stachyose, fructo-oligosaccharides, isomalto-oligosaccharides, galacto-oligosaccharides are effective for proliferation of resident or implanted bifidobacteria in intestine and cause the reduction of faecal ammonia and pH as well as serum cholesterol and triglyceride level of the host5-8.

In our studies with volunteers, improvement of intestinal flora as well as intestinal environment were observed by oral administration of various oligosaccharides, including fructo-oligosaccharides, palatinose condensate, raffinose, and soybean oligosaccharides. Table 4 shows utilisation of five oligosaccharides by intestinal bacteria. Most of the oligosaccharides stimulated the growth of bifidobacteria in vitro and in vivo (Fig.6), and caused reduction of faecal pH, beta-glucuronidase, azoreductase, and indole, serum cholesterol and triglycerides levels as well as the blood pressure of elderly patients with hyperlipidaemia. From the results presented here, it may be concluded that oligosaccharides are considered to enhance the intestinal bifidobacteria, to promote the intestinal flora, the consistency of stool, and lipid metabolism.

We also studied the effect of dietary fibre on the faecal flora and faecal metabolite in eight healthy adult volunteers fed with low cholesterol (LC) diet, high cholesterol (HC) diet and high cholesterol supplemented with polydextrose (15g/day) (HC-P) diet for a 12 day interval. While a decrease (ca. 25%) of the faecal weight was observed during HC diet, HC-P diet led to a ca. 30% increase of the faecal weight. The faecal pH increased (ca. 0.2) during HC diet and decreased (ca. 0.6) during HC-P diet. Faecal putrefactive products including phenol, p-cresol, indole, iso-butyric and iso-valeric acids remarkably decreased by the administration of polydextrose (Fig. 7). In addition, the occurrence of clostridia, including Clostridium perfringens was higher during HC diet than during HC-P diet. These results suggested that polydextrose has a beneficial effect on the intestinal environment and human health through changing the balance and metabolic activity of the intestinal flora and physiologic activity of the host and that intestinal clostridia are involved in putrefactive activity in the intestinal content9.

Effect of yoghurt on human health

Yoghurt and other fermented milk products may enhance human health by the following mechanisms10.

  1. Effect of milk used for yoghurt production: Milk protein prevents stomach cancer. Lactose increases indigenous bifidobacteria in the intestine. Calcium and iron prevent osteoporosis and anaemia, respectively. Vitamin A may prevent certain cancers.
  2. Effect of fermentation products of yoghurt: Lactate prevents constipation and inhibits putrefactive bacteria. Peptone and peptides promote liver function.
  3. Effect of lactic acid bacteria (LAB): LAB detoxify carcinogens, stimulate immune response, and lower serum cholesterol.

Several recent studies have focused on bifidobacteria to establish the importance of these bacteria in influencing certain normal functions of the intestinal tract and in exploring its role in human health and diseases. In Japan, bifidobacteria now-a-days have been used as dietary supplements or as starter culture for yoghurt and other cultured milk products with the thought that such products may help the promotion of health. The effects of the daily intake of such products are reported as follows:

  1. to suppress the putrefactive bacteria as well as intestinal putrefaction, for the prevention of constipation, geriatric diseases, including cancer,
  2. to prevent and treat antibiotic-associated diarrhoea,
  3. to stimulate immune response,
  4. to contribute to a greater resistance to infection.

Figure 7. Influence of low cholesterol (LC) diet, high cholesterol (HC) diet supplemented with polydextrose. (HCP) on b -glucoronidase, b -glucosidase, nitro-reductase and tryptophanase activity in human faeces.

Effect of oral administration of bifidobacteria on intestinal flora and intestinal metabolites

We observed that oral administration of 109 Bifidobacterium longum preparation per day for 5 weeks to 5 healthy volunteers from 25 to 35 years old resulted in the increase of the counts of bifidobacteria and the remarkable decrease of the counts and frequencies of occurrence of clostridia in stools. This result also reflected a decrease of ammonia concentration and beta-glucuronidase activity in both faeces and serum11.

Serum cholesterol in Hartley male rabbits fed with 0.25% cholesterol diet supplemented with 1010/day of B. longum for 13 weeks were compared with the control diet group. In 2 of 3 rabbits fed with diet supplemented with B. longum there was a remarkably suppressed increase in cholesterol level, but 1 of 3 rabbits showed no effect.

Table 4. Utilisation of 5 sugars by various intestinal bacteria. 1000 1000 1000 1000
Bacterial species

Number of strains

SOR

RAF

STA

FOS

GLU

Bifidobacterium:            
B. bifidum

6

--

--

±

--

++

B. longum

8

+++

++

+++

++

+++

B. breve

4

+++

+++

+++

+

+++

B. infantis

2

+++

+++

1000

+++

++

+++

B. adolescentis

9

++

++

++

++

+++

Lactobacillus:            
L. casei

2

--

--

--

--

+

L. acidophilus

3

±

±

±

+

++

L. gasseri

1

1000

+

+

--

+

+

L. salivarius

2

++

++

++

+

++

Bacteroides:            
B. vulgatis

9

±

±

+

+

++

B. fragilis

3

+

+

+

+

++

B. distasonis

5

+

±

+

±

+

B. ovatus

4

+

+

+

+

++

B. thetaiotamicron

2

±

±

±

+

+

B. uniformis

1

+

+

+

+

+

B. melaninogenicus

1

+

+

+

+

+

Fusobacterium:            
F. varium

1

--

--

--

--

±

F. necrophorum

1

--

--

--

--

--

Mitsuokella multiacida

4

++

++

++

+

++

Megamonas hypermegas

1

++

++

++

+

+++

Eubacterium:            
E. limosum

3

--

--

--

±

++

E. aerofaciens

2

±

±

±

±

++

E. nitritogenes

1

--

--

--

--

++

E. lentum

1

--

--

--

--

--

Clostridium:            
C. perfringens

6

--

--

--

--

+

C. paraputrificum

4

--

--

--

--

+++

C. difficile

4

--

--

--

--

+

C. butyricum

2

++

++

++

++

+++

C. clostridiforme

2

±

±

±

--

+

C. innocuum

1

--

--

--

±

+++

C. ramosum

1

±

+

±

++

+++

C. sordelli

1

--

--

--

--

±

C. septicum

1

--

--

--

--

+++

C. cadaveris

1

--

--

--

--

±

C. sporogenes

1

--

--

--

--

±

Propionibacterium acnes

1

--

--

--

--

++

Peptostreptococcus:            
P. magnus

1

--

--

--

--

--

P. anaerobius

1

--

--

--

--

±

P. productus

2

±

±

±

+

++

P. asaccharolyticus

1

--

--

--

--

±

P. prevotti

1

±

±

±

--

+

Veillonella:            
V. dispar

1

--

--

--

--

--

V. parvula

2

--

--

--

--

--

Megashaera elsdenii

1

--

--

--

--

±

Escherichia coli

6

--

±

--

--

++

Klebsiella pneumoniae

3

+

+

+

+

++

Enterobacter aerogenes

1

< 1000 p align="center">+

±

±

±

±

Enterococcus            
E. faecalis

1

±

±

±

+

+++

E. faecium

1

+

±

+

+

+++

Streptococcus pyogenes

1

--

--

--

± <